Index

G

get_obo() (in module ncbi_gene_pyobo.cli)

M

module ncbi_gene_pyobo ncbi_gene_pyobo.cli ncbi_gene_pyobo.constants ncbi_gene_pyobo.duckdb_utils ncbi_gene_pyobo.transform ncbi_gene_pyobo.transform_utils ncbi_gene_pyobo.transform_utils.ontology_transform ncbi_gene_pyobo.transform_utils.transform

N

ncbi_gene_pyobo module ncbi_gene_pyobo.cli module ncbi_gene_pyobo.constants module ncbi_gene_pyobo.duckdb_utils module

ncbi_gene_pyobo.transform module ncbi_gene_pyobo.transform_utils module ncbi_gene_pyobo.transform_utils.ontology_transform module ncbi_gene_pyobo.transform_utils.transform module ncbigene_2_kgx() (in module ncbi_gene_pyobo.duckdb_utils)

O

OntologyTransform (class in ncbi_gene_pyobo.transform_utils) (class in ncbi_gene_pyobo.transform_utils.ontology_transform)

P

parse() (ncbi_gene_pyobo.transform_utils.ontology_transform.OntologyTransform method) (ncbi_gene_pyobo.transform_utils.OntologyTransform method)

R

run() (ncbi_gene_pyobo.transform_utils.ontology_transform.OntologyTransform method) (ncbi_gene_pyobo.transform_utils.OntologyTransform method)

T

Transform (class in ncbi_gene_pyobo.transform_utils.transform)

transform() (in module ncbi_gene_pyobo.transform)