Class: Disease

URI: dppkb:Disease

classDiagram class Disease click Disease href "../Disease" Disease : animal_models Disease --> "*" AnimalModel : animal_models click AnimalModel href "../AnimalModel" Disease : biochemical Disease --> "*" Biochemical : biochemical click Biochemical href "../Biochemical" Disease : categories Disease : category Disease : description Disease : diagnosis Disease --> "*" Diagnosis : diagnosis click Diagnosis href "../Diagnosis" Disease : environmental Disease --> "*" Environmental : environmental click Environmental href "../Environmental" Disease : epidemiology Disease --> "*" EpidemiologyInfo : epidemiology click EpidemiologyInfo href "../EpidemiologyInfo" Disease : genetic Disease --> "*" Genetic : genetic click Genetic href "../Genetic" Disease : has_subtypes Disease --> "*" Subtype : has_subtypes click Subtype href "../Subtype" Disease : infectious_agent Disease --> "*" InfectiousAgent : infectious_agent click InfectiousAgent href "../InfectiousAgent" Disease : inheritance Disease --> "*" Inheritance : inheritance click Inheritance href "../Inheritance" Disease : modeling_considerations Disease --> "*" ModelingConsideration : modeling_considerations click ModelingConsideration href "../ModelingConsideration" Disease : name Disease : notes Disease : parents Disease : pathophysiology Disease --> "*" Pathophysiology : pathophysiology click Pathophysiology href "../Pathophysiology" Disease : phenotypes Disease --> "*" Phenotype : phenotypes click Phenotype href "../Phenotype" Disease : prevalence Disease --> "*" Prevalence : prevalence click Prevalence href "../Prevalence" Disease : progression Disease --> "*" ProgressionInfo : progression click ProgressionInfo href "../ProgressionInfo" Disease : synonyms Disease : transmission Disease --> "*" Transmission : transmission click Transmission href "../Transmission" Disease : treatments Disease --> "*" Treatment : treatments click Treatment href "../Treatment"

Slots

Name	Cardinality and Range	Inheritance
name	1 String	direct
description	0..1 String	direct
category	0..1 String	direct
parents	* String	direct
has_subtypes	* Subtype	direct
prevalence	* Prevalence	direct
progression	* ProgressionInfo	direct
pathophysiology	* Pathophysiology	direct
phenotypes	* Phenotype	direct
biochemical	* Biochemical	direct
genetic	* Genetic	direct
environmental	* Environmental	direct
treatments	* Treatment	direct
categories	* String	direct
infectious_agent	* InfectiousAgent	direct
transmission	* Transmission	direct
modeling_considerations	* ModelingConsideration	direct
epidemiology	* EpidemiologyInfo	direct
diagnosis	* Diagnosis	direct
synonyms	* String	direct
inheritance	* Inheritance	direct
animal_models	* AnimalModel	direct
notes	0..1 String	direct

Usages

used by	used in	type	used
DiseaseCollection	diseases	range	Disease

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/dppkb

Mappings

Mapping Type	Mapped Value
self	dppkb:Disease
native	dppkb:Disease

LinkML Source

Direct

name: Disease
from_schema: https://w3id.org/dppkb
slots:
- name
- description
- category
- parents
- has_subtypes
- prevalence
- progression
- pathophysiology
- phenotypes
- biochemical
- genetic
- environmental
- treatments
- categories
- infectious_agent
- transmission
- modeling_considerations
- epidemiology
- diagnosis
- synonyms
- inheritance
- animal_models
- notes

Induced

name: Disease
from_schema: https://w3id.org/dppkb
attributes:
  name:
    name: name
    examples:
    - value: Adolescent Nephronophthisis
    from_schema: https://w3id.org/dppkb
    rank: 1000
    identifier: true
    alias: name
    owner: Disease
    domain_of:
    - Subtype
    - EpidemiologyInfo
    - Pathophysiology
    - Phenotype
    - Biochemical
    - Genetic
    - Environmental
    - Disease
    - Treatment
    - InfectiousAgent
    - Transmission
    - Assay
    - Diagnosis
    - Inheritance
    - Variant
    - Mechanism
    - ModelingConsideration
    range: string
    required: true
  description:
    name: description
    from_schema: https://w3id.org/dppkb
    rank: 1000
    alias: description
    owner: Disease
    domain_of:
    - Subtype
    - EpidemiologyInfo
    - Pathophysiology
    - Environmental
    - Disease
    - AnimalModel
    - Treatment
    - InfectiousAgent
    - Transmission
    - Assay
    - Inheritance
    - Variant
    - Mechanism
    - ModelingConsideration
    range: string
  category:
    name: category
    examples:
    - value: Hematologic
    from_schema: https://w3id.org/dppkb
    rank: 1000
    alias: category
    owner: Disease
    domain_of:
    - Phenotype
    - Disease
    - AnimalModel
    range: string
  parents:
    name: parents
    examples:
    - value: '[''Bacterial Infection'']'
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: parents
    owner: Disease
    domain_of:
    - Disease
    range: string
  has_subtypes:
    name: has_subtypes
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: has_subtypes
    owner: Disease
    domain_of:
    - Disease
    - InfectiousAgent
    range: Subtype
    inlined: true
    inlined_as_list: true
  prevalence:
    name: prevalence
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: prevalence
    owner: Disease
    domain_of:
    - Disease
    range: Prevalence
    inlined: true
    inlined_as_list: true
  progression:
    name: progression
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: progression
    owner: Disease
    domain_of:
    - Disease
    range: ProgressionInfo
    inlined: true
    inlined_as_list: true
  pathophysiology:
    name: pathophysiology
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: pathophysiology
    owner: Disease
    domain_of:
    - Disease
    range: Pathophysiology
    inlined: true
    inlined_as_list: true
  phenotypes:
    name: phenotypes
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: phenotypes
    owner: Disease
    domain_of:
    - Disease
    range: Phenotype
    inlined: true
    inlined_as_list: true
  biochemical:
    name: biochemical
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: biochemical
    owner: Disease
    domain_of:
    - Disease
    range: Biochemical
    inlined: true
    inlined_as_list: true
  genetic:
    name: genetic
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: genetic
    owner: Disease
    domain_of:
    - Disease
    range: Genetic
    inlined: true
    inlined_as_list: true
  environmental:
    name: environmental
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: environmental
    owner: Disease
    domain_of:
    - Disease
    range: Environmental
    inlined: true
    inlined_as_list: true
  treatments:
    name: treatments
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: treatments
    owner: Disease
    domain_of:
    - Disease
    range: Treatment
    inlined: true
    inlined_as_list: true
  categories:
    name: categories
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: categories
    owner: Disease
    domain_of:
    - Disease
    range: string
  infectious_agent:
    name: infectious_agent
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: infectious_agent
    owner: Disease
    domain_of:
    - Disease
    range: InfectiousAgent
    inlined: true
    inlined_as_list: true
  transmission:
    name: transmission
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: transmission
    owner: Disease
    domain_of:
    - Disease
    range: Transmission
    inlined: true
    inlined_as_list: true
  modeling_considerations:
    name: modeling_considerations
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: modeling_considerations
    owner: Disease
    domain_of:
    - Disease
    range: ModelingConsideration
    inlined: true
    inlined_as_list: true
  epidemiology:
    name: epidemiology
    examples:
    - value: '[''Global'']'
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: epidemiology
    owner: Disease
    domain_of:
    - Disease
    range: EpidemiologyInfo
    inlined: true
    inlined_as_list: true
  diagnosis:
    name: diagnosis
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: diagnosis
    owner: Disease
    domain_of:
    - Disease
    range: Diagnosis
    inlined: true
    inlined_as_list: true
  synonyms:
    name: synonyms
    examples:
    - value: '[''CYFRA 21-1'']'
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: synonyms
    owner: Disease
    domain_of:
    - Pathophysiology
    - Biochemical
    - Environmental
    - Disease
    range: string
  inheritance:
    name: inheritance
    examples:
    - value: Autosomal Dominant
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: inheritance
    owner: Disease
    domain_of:
    - Genetic
    - Disease
    range: Inheritance
    inlined: true
    inlined_as_list: true
  animal_models:
    name: animal_models
    from_schema: https://w3id.org/dppkb
    rank: 1000
    multivalued: true
    alias: animal_models
    owner: Disease
    domain_of:
    - Disease
    range: AnimalModel
    inlined: true
    inlined_as_list: true
  notes:
    name: notes
    examples:
    - value: Contagious stage where symptoms appear and the bacteria can be spread
        to others.
    from_schema: https://w3id.org/dppkb
    rank: 1000
    alias: notes
    owner: Disease
    domain_of:
    - Prevalence
    - ProgressionInfo
    - EpidemiologyInfo
    - Pathophysiology
    - Phenotype
    - Biochemical
    - Genetic
    - Environmental
    - Disease
    - Treatment
    - Transmission
    - Diagnosis
    range: string