Installation

The document describes how to install genophenocorr into your environment.

Stable release

Installing genophenocorr is easy - we publish releases on Python Package Index (PyPi).

Run the following to install the latest stable release:

python3 -m pip install genophenocorr

Latest release

The latest release can be installed by cloning the GitHub repository:

git clone https://github.com/monarch-initiative/genophenocorr.git
cd genophenocorr

# Switch to `develop` branch to access the latest features
git checkout develop

python3 -m pip install .

The code above will clone the source code from GitHub repository, switch to the develop branch with the latest features, and install the library into the current Python (virtual) environment.