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monarch-ingest

Details

GitHub monarch-initiative/monarch-ingest
Language Python
Description Data ingest application for Monarch Initiative knowledge graph using Koza

Dependencies

External Dependencies

Package Version
python ^3.10
biolink-model ^4.2.0
bmt ^1.0.15
cat-merge 0.2.1
closurizer 0.7.0
kghub-downloader ^0.4.1
kgx ^2.4.2
koza ^0.6.1
linkml ^1.7.8
linkml-solr 0.1.6
multi-indexer 0.0.5
botocore ^1.31
importlib-metadata >=4.6.1
loguru *
pydantic ^2.5
sh ^1.14.3
typer ^0.12
yamllint ^1.35.1
linkml-runtime ^1.7.5
pandas 2.0.3

Documentation

monarch_ingest

documentation

Monarch Ingest is a data-ingest application for Monarch Initiative using Koza.