monarch-ingest
Details
GitHub | monarch-initiative/monarch-ingest |
Language | Python |
Description | Data ingest application for Monarch Initiative knowledge graph using Koza |
Dependencies
External Dependencies
Package | Version |
---|---|
python | ^3.10 |
biolink-model | ^4.2.0 |
bmt | ^1.0.15 |
cat-merge | 0.2.1 |
closurizer | 0.7.0 |
kghub-downloader | ^0.4.1 |
kgx | ^2.4.2 |
koza | ^0.6.1 |
linkml | ^1.7.8 |
linkml-solr | 0.1.6 |
multi-indexer | 0.0.5 |
botocore | ^1.31 |
importlib-metadata | >=4.6.1 |
loguru | * |
pydantic | ^2.5 |
sh | ^1.14.3 |
typer | ^0.12 |
yamllint | ^1.35.1 |
linkml-runtime | ^1.7.5 |
pandas | 2.0.3 |
Documentation
monarch_ingest
Monarch Ingest is a data-ingest application for Monarch Initiative using Koza.