Class: Node

UI conatiner class extending Entity with additional information

URI: https://w3id.org/monarch/monarch-py/:Node

 classDiagram
    class Node
      Entity <|-- Node

      Node : association_counts

          Node --|> AssociationCount : association_counts

      Node : category

      Node : description

      Node : id

      Node : in_taxon

      Node : in_taxon_label

      Node : inheritance

          Node --|> Entity : inheritance

      Node : name

      Node : node_hierarchy

          Node --|> NodeHierarchy : node_hierarchy

      Node : provided_by

      Node : symbol

      Node : synonym

      Node : xref

Inheritance

• Entity
  • Node

Slots

Name	Cardinality and Range	Description	Inheritance
in_taxon	0..1 String	The biolink taxon that the entity is in the closure of	direct
in_taxon_label	0..1 String	The label of the biolink taxon that the entity is in the closure of	direct
inheritance	0..1 Entity		direct
association_counts	1..* AssociationCount		direct
node_hierarchy	0..1 NodeHierarchy		direct
id	1..1 String		Entity
category	0..1 String		Entity
name	0..1 String		Entity
description	0..1 String		Entity
xref	0..* String		Entity
provided_by	0..1 String		Entity
symbol	0..1 String		Entity
synonym	0..* String		Entity

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/monarch/monarch-py

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/monarch/monarch-py/:Node
native	https://w3id.org/monarch/monarch-py/:Node

LinkML Source

Direct

name: Node
description: UI conatiner class extending Entity with additional information
from_schema: https://w3id.org/monarch/monarch-py
is_a: Entity
slots:
- in_taxon
- in_taxon_label
- inheritance
- association_counts
- node_hierarchy

Induced

name: Node
description: UI conatiner class extending Entity with additional information
from_schema: https://w3id.org/monarch/monarch-py
is_a: Entity
attributes:
  in_taxon:
    name: in_taxon
    description: The biolink taxon that the entity is in the closure of.
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: in_taxon
    owner: Node
    domain_of:
    - Entity
    - Node
    range: string
  in_taxon_label:
    name: in_taxon_label
    description: The label of the biolink taxon that the entity is in the closure
      of.
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: in_taxon_label
    owner: Node
    domain_of:
    - Entity
    - Node
    range: string
  inheritance:
    name: inheritance
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: inheritance
    owner: Node
    domain_of:
    - Node
    range: Entity
    inlined: true
  association_counts:
    name: association_counts
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    multivalued: true
    alias: association_counts
    owner: Node
    domain_of:
    - Node
    range: AssociationCount
    required: true
    inlined: true
    inlined_as_list: true
  node_hierarchy:
    name: node_hierarchy
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: node_hierarchy
    owner: Node
    domain_of:
    - Node
    range: NodeHierarchy
    inlined: true
  id:
    name: id
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    identifier: true
    alias: id
    owner: Node
    domain_of:
    - Association
    - Entity
    - HistoPheno
    - HistoBin
    range: string
    required: true
  category:
    name: category
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    multivalued: false
    alias: category
    owner: Node
    domain_of:
    - Association
    - AssociationCount
    - AssociationTypeMapping
    - Entity
    range: string
  name:
    name: name
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: name
    owner: Node
    domain_of:
    - Entity
    range: string
  description:
    name: description
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: description
    owner: Node
    domain_of:
    - Entity
    range: string
  xref:
    name: xref
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    multivalued: true
    alias: xref
    owner: Node
    domain_of:
    - Entity
    range: string
  provided_by:
    name: provided_by
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: provided_by
    owner: Node
    domain_of:
    - Association
    - Entity
    range: string
  symbol:
    name: symbol
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: symbol
    owner: Node
    domain_of:
    - Entity
    range: string
  synonym:
    name: synonym
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    multivalued: true
    alias: synonym
    owner: Node
    domain_of:
    - Entity
    range: string