Class: EnrichmentStatistics
Statistical measures for pathway enrichment analysis.
URI: [namo:EnrichmentStatistics](https://w3id.org/monarch-initiative/namo/EnrichmentStatistics)
[Float](Float.md) | Quantitative enrichment score | direct | | [p_value](p_value.md) | 0..1
[Float](Float.md) | Statistical p-value for enrichment | direct | | [q_value](q_value.md) | 0..1
[Float](Float.md) | False discovery rate corrected p-value | direct | | [genes_in_pathway](genes_in_pathway.md) | 0..1
[Integer](Integer.md) | Number of genes in the pathway | direct | | [genes_in_dataset](genes_in_dataset.md) | 0..1
[Integer](Integer.md) | Number of genes from dataset found in pathway | direct | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [PathwayConcordance](PathwayConcordance.md) | [enrichment_statistics](enrichment_statistics.md) | range | [EnrichmentStatistics](EnrichmentStatistics.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/monarch-initiative/namo ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | namo:EnrichmentStatistics | | native | namo:EnrichmentStatistics | ## LinkML Source ### Direct
### Induced
classDiagram
class EnrichmentStatistics
click EnrichmentStatistics href "../EnrichmentStatistics/"
EnrichmentStatistics : enrichment_score
EnrichmentStatistics : genes_in_dataset
EnrichmentStatistics : genes_in_pathway
EnrichmentStatistics : p_value
EnrichmentStatistics : q_value
## Slots
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
| [enrichment_score](enrichment_score.md) | 0..1 [Float](Float.md) | Quantitative enrichment score | direct | | [p_value](p_value.md) | 0..1
[Float](Float.md) | Statistical p-value for enrichment | direct | | [q_value](q_value.md) | 0..1
[Float](Float.md) | False discovery rate corrected p-value | direct | | [genes_in_pathway](genes_in_pathway.md) | 0..1
[Integer](Integer.md) | Number of genes in the pathway | direct | | [genes_in_dataset](genes_in_dataset.md) | 0..1
[Integer](Integer.md) | Number of genes from dataset found in pathway | direct | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [PathwayConcordance](PathwayConcordance.md) | [enrichment_statistics](enrichment_statistics.md) | range | [EnrichmentStatistics](EnrichmentStatistics.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/monarch-initiative/namo ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | namo:EnrichmentStatistics | | native | namo:EnrichmentStatistics | ## LinkML Source ### Direct
name: EnrichmentStatistics
description: Statistical measures for pathway enrichment analysis.
from_schema: https://w3id.org/monarch-initiative/namo
attributes:
enrichment_score:
name: enrichment_score
description: Quantitative enrichment score.
from_schema: https://w3id.org/monarch-initiative/namo
domain_of:
- Pathway
- EnrichmentStatistics
range: float
p_value:
name: p_value
description: Statistical p-value for enrichment.
from_schema: https://w3id.org/monarch-initiative/namo
domain_of:
- Gene
- StatisticalSignificance
- EnrichmentStatistics
range: float
q_value:
name: q_value
description: False discovery rate corrected p-value.
from_schema: https://w3id.org/monarch-initiative/namo
rank: 1000
domain_of:
- EnrichmentStatistics
range: float
genes_in_pathway:
name: genes_in_pathway
description: Number of genes in the pathway.
from_schema: https://w3id.org/monarch-initiative/namo
rank: 1000
domain_of:
- EnrichmentStatistics
range: integer
genes_in_dataset:
name: genes_in_dataset
description: Number of genes from dataset found in pathway.
from_schema: https://w3id.org/monarch-initiative/namo
rank: 1000
domain_of:
- EnrichmentStatistics
range: integer
name: EnrichmentStatistics
description: Statistical measures for pathway enrichment analysis.
from_schema: https://w3id.org/monarch-initiative/namo
attributes:
enrichment_score:
name: enrichment_score
description: Quantitative enrichment score.
from_schema: https://w3id.org/monarch-initiative/namo
owner: EnrichmentStatistics
domain_of:
- Pathway
- EnrichmentStatistics
range: float
p_value:
name: p_value
description: Statistical p-value for enrichment.
from_schema: https://w3id.org/monarch-initiative/namo
owner: EnrichmentStatistics
domain_of:
- Gene
- StatisticalSignificance
- EnrichmentStatistics
range: float
q_value:
name: q_value
description: False discovery rate corrected p-value.
from_schema: https://w3id.org/monarch-initiative/namo
rank: 1000
owner: EnrichmentStatistics
domain_of:
- EnrichmentStatistics
range: float
genes_in_pathway:
name: genes_in_pathway
description: Number of genes in the pathway.
from_schema: https://w3id.org/monarch-initiative/namo
rank: 1000
owner: EnrichmentStatistics
domain_of:
- EnrichmentStatistics
range: integer
genes_in_dataset:
name: genes_in_dataset
description: Number of genes from dataset found in pathway.
from_schema: https://w3id.org/monarch-initiative/namo
rank: 1000
owner: EnrichmentStatistics
domain_of:
- EnrichmentStatistics
range: integer