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Class: FunctionalAssay

A functional assay used to assess biological capabilities.

URI: [namo:FunctionalAssay](https://w3id.org/monarch-initiative/namo/FunctionalAssay)
classDiagram class FunctionalAssay click FunctionalAssay href "../FunctionalAssay/" NamedThing <|-- FunctionalAssay click NamedThing href "../NamedThing/" FunctionalAssay : assay_result FunctionalAssay : assay_type FunctionalAssay : description FunctionalAssay : id FunctionalAssay : methodology FunctionalAssay : name FunctionalAssay : reference_value FunctionalAssay : type FunctionalAssay : units
## Inheritance * [NamedThing](NamedThing.md) * **FunctionalAssay** ## Slots | Name | Cardinality and Range | Description | Inheritance | | --- | --- | --- | --- | | [assay_type](assay_type.md) | 0..1
[String](String.md) | Type of functional assay (e | direct | | [assay_result](assay_result.md) | 0..1
[Float](Float.md) | Quantitative result of the assay | direct | | [reference_value](reference_value.md) | 0..1
[Float](Float.md) | Reference or control value for comparison | direct | | [units](units.md) | 0..1
[String](String.md) | Units of measurement for the assay result | direct | | [methodology](methodology.md) | 0..1
[String](String.md) | Detailed methodology for the assay | direct | | [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) | | [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) | | [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) | | [type](type.md) | 0..1
[String](String.md) | | [NamedThing](NamedThing.md) | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [FunctionalParity](FunctionalParity.md) | [functional_assays](functional_assays.md) | range | [FunctionalAssay](FunctionalAssay.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/monarch-initiative/namo ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | namo:FunctionalAssay | | native | namo:FunctionalAssay | ## LinkML Source ### Direct
name: FunctionalAssay
description: A functional assay used to assess biological capabilities.
from_schema: https://w3id.org/monarch-initiative/namo
is_a: NamedThing
attributes:
  assay_type:
    name: assay_type
    description: Type of functional assay (e.g., TEER, permeability, metabolic activity).
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - FunctionalAssay
  assay_result:
    name: assay_result
    description: Quantitative result of the assay.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - FunctionalAssay
    range: float
  reference_value:
    name: reference_value
    description: Reference or control value for comparison.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - FunctionalAssay
    range: float
  units:
    name: units
    description: Units of measurement for the assay result.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - FunctionalAssay
  methodology:
    name: methodology
    description: Detailed methodology for the assay.
    from_schema: https://w3id.org/monarch-initiative/namo
    domain_of:
    - MolecularSimilarity
    - FunctionalAssay

### Induced
name: FunctionalAssay
description: A functional assay used to assess biological capabilities.
from_schema: https://w3id.org/monarch-initiative/namo
is_a: NamedThing
attributes:
  assay_type:
    name: assay_type
    description: Type of functional assay (e.g., TEER, permeability, metabolic activity).
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: FunctionalAssay
    domain_of:
    - FunctionalAssay
    range: string
  assay_result:
    name: assay_result
    description: Quantitative result of the assay.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: FunctionalAssay
    domain_of:
    - FunctionalAssay
    range: float
  reference_value:
    name: reference_value
    description: Reference or control value for comparison.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: FunctionalAssay
    domain_of:
    - FunctionalAssay
    range: float
  units:
    name: units
    description: Units of measurement for the assay result.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: FunctionalAssay
    domain_of:
    - FunctionalAssay
    range: string
  methodology:
    name: methodology
    description: Detailed methodology for the assay.
    from_schema: https://w3id.org/monarch-initiative/namo
    owner: FunctionalAssay
    domain_of:
    - MolecularSimilarity
    - FunctionalAssay
    range: string
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    owner: FunctionalAssay
    domain_of:
    - NamedThing
    - Reference
    - BiolinkEntity
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    slot_uri: schema:name
    owner: FunctionalAssay
    domain_of:
    - NamedThing
    - BiolinkEntity
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    slot_uri: schema:description
    owner: FunctionalAssay
    domain_of:
    - NamedThing
    - BiolinkEntity
    range: string
  type:
    name: type
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    designates_type: true
    owner: FunctionalAssay
    domain_of:
    - NamedThing
    range: string