Class: Reference

A literature reference with identifier and title for citing published work.

classDiagram class Reference click Reference href "../Reference/" Reference : authors Reference : id Reference : journal Reference : title Reference : url Reference : year

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 Uriorcurie	Persistent identifier for the reference (DOI, PMID, PMCID, etc	direct
title	1 String	Title of the referenced publication or dataset	direct
authors	* String	Authors of the publication	direct
journal	0..1 String	Journal or publication venue	direct
year	0..1 Integer	Publication year	direct
url	0..1 Uri	URL to access the publication	direct

Usages

used by	used in	type	used
NAMModel	references	range	Reference
CellularSystem	references	range	Reference
TwoDCellCulture	references	range	Reference
ThreeDCellCulture	references	range	Reference
CoCulture	references	range	Reference
Organoid	references	range	Reference
CellLineModel	references	range	Reference
MicrophysiologicalSystem	references	range	Reference
OrganOnChip	references	range	Reference
TissueOnChip	references	range	Reference
InSilicoModel	references	range	Reference
QSARModel	references	range	Reference
PBPKModel	references	range	Reference
DigitalTwin	references	range	Reference
MLModel	references	range	Reference
MetabolicModel	references	range	Reference

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/monarch-initiative/namo

Mappings

Mapping Type	Mapped Value
self	namo:Reference
native	namo:Reference

LinkML Source

Direct

name: Reference
description: A literature reference with identifier and title for citing published
  work.
from_schema: https://w3id.org/monarch-initiative/namo
attributes:
  id:
    name: id
    description: Persistent identifier for the reference (DOI, PMID, PMCID, etc.)
    from_schema: https://w3id.org/monarch-initiative/namo
    identifier: true
    domain_of:
    - NamedThing
    - Reference
    range: uriorcurie
    required: true
  title:
    name: title
    description: Title of the referenced publication or dataset
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reference
    required: true
  authors:
    name: authors
    description: Authors of the publication
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reference
    multivalued: true
  journal:
    name: journal
    description: Journal or publication venue
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reference
  year:
    name: year
    description: Publication year
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reference
    range: integer
  url:
    name: url
    description: URL to access the publication
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reference
    range: uri

Induced

name: Reference
description: A literature reference with identifier and title for citing published
  work.
from_schema: https://w3id.org/monarch-initiative/namo
attributes:
  id:
    name: id
    description: Persistent identifier for the reference (DOI, PMID, PMCID, etc.)
    from_schema: https://w3id.org/monarch-initiative/namo
    identifier: true
    alias: id
    owner: Reference
    domain_of:
    - NamedThing
    - Reference
    range: uriorcurie
    required: true
  title:
    name: title
    description: Title of the referenced publication or dataset
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    alias: title
    owner: Reference
    domain_of:
    - Reference
    range: string
    required: true
  authors:
    name: authors
    description: Authors of the publication
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    alias: authors
    owner: Reference
    domain_of:
    - Reference
    range: string
    multivalued: true
  journal:
    name: journal
    description: Journal or publication venue
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    alias: journal
    owner: Reference
    domain_of:
    - Reference
    range: string
  year:
    name: year
    description: Publication year
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    alias: year
    owner: Reference
    domain_of:
    - Reference
    range: integer
  url:
    name: url
    description: URL to access the publication
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    alias: url
    owner: Reference
    domain_of:
    - Reference
    range: uri