Class: Reproducibility

Assessment of experimental reproducibility and consistency of the model system.

URI: [namo:Reproducibility](https://w3id.org/monarch-initiative/namo/Reproducibility)

classDiagram class Reproducibility click Reproducibility href "../Reproducibility/" NamedThing <|-- Reproducibility click NamedThing href "../NamedThing/" Reproducibility : batch_to_batch_variation Reproducibility : coefficient_of_variation Reproducibility : description Reproducibility : id Reproducibility : inter_laboratory_consistency Reproducibility : name Reproducibility : quality_control_metrics Reproducibility --> "*" QualityControlMetric : quality_control_metrics click QualityControlMetric href "../QualityControlMetric/" Reproducibility : replicate_count Reproducibility : reproducibility_score Reproducibility : type

## Inheritance * [NamedThing](NamedThing.md) * **Reproducibility** ## Slots | Name | Cardinality and Range | Description | Inheritance | | --- | --- | --- | --- | | [reproducibility_score](reproducibility_score.md) | 0..1
[Float](Float.md) | Quantitative score (0 | direct | | [coefficient_of_variation](coefficient_of_variation.md) | 0..1
[Float](Float.md) | Coefficient of variation across experimental replicates | direct | | [batch_to_batch_variation](batch_to_batch_variation.md) | 0..1
[Float](Float.md) | Measure of variation between different experimental batches | direct | | [inter_laboratory_consistency](inter_laboratory_consistency.md) | 0..1
[Float](Float.md) | Measure of consistency across different laboratories | direct | | [replicate_count](replicate_count.md) | 0..1
[Integer](Integer.md) | Number of experimental replicates used in assessment | direct | | [quality_control_metrics](quality_control_metrics.md) | *
[QualityControlMetric](QualityControlMetric.md) | List of quality control measures and their values | direct | | [id](id.md) | 1
[Uriorcurie](Uriorcurie.md) | A unique identifier for a thing | [NamedThing](NamedThing.md) | | [name](name.md) | 0..1
[String](String.md) | A human-readable name for a thing | [NamedThing](NamedThing.md) | | [description](description.md) | 0..1
[String](String.md) | A human-readable description for a thing | [NamedThing](NamedThing.md) | | [type](type.md) | 0..1
[String](String.md) | | [NamedThing](NamedThing.md) | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [StructuredConcordanceResult](StructuredConcordanceResult.md) | [reproducibility](reproducibility.md) | range | [Reproducibility](Reproducibility.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/monarch-initiative/namo ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | namo:Reproducibility | | native | namo:Reproducibility | ## LinkML Source ### Direct

name: Reproducibility
description: Assessment of experimental reproducibility and consistency of the model
  system.
from_schema: https://w3id.org/monarch-initiative/namo
is_a: NamedThing
attributes:
  reproducibility_score:
    name: reproducibility_score
    description: Quantitative score (0.0-1.0) representing reproducibility.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reproducibility
    range: float
  coefficient_of_variation:
    name: coefficient_of_variation
    description: Coefficient of variation across experimental replicates.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reproducibility
    range: float
  batch_to_batch_variation:
    name: batch_to_batch_variation
    description: Measure of variation between different experimental batches.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reproducibility
    range: float
  inter_laboratory_consistency:
    name: inter_laboratory_consistency
    description: Measure of consistency across different laboratories.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reproducibility
    range: float
  replicate_count:
    name: replicate_count
    description: Number of experimental replicates used in assessment.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reproducibility
    range: integer
  quality_control_metrics:
    name: quality_control_metrics
    description: List of quality control measures and their values.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    domain_of:
    - Reproducibility
    range: QualityControlMetric
    multivalued: true
    inlined_as_list: true

### Induced

name: Reproducibility
description: Assessment of experimental reproducibility and consistency of the model
  system.
from_schema: https://w3id.org/monarch-initiative/namo
is_a: NamedThing
attributes:
  reproducibility_score:
    name: reproducibility_score
    description: Quantitative score (0.0-1.0) representing reproducibility.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: Reproducibility
    domain_of:
    - Reproducibility
    range: float
  coefficient_of_variation:
    name: coefficient_of_variation
    description: Coefficient of variation across experimental replicates.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: Reproducibility
    domain_of:
    - Reproducibility
    range: float
  batch_to_batch_variation:
    name: batch_to_batch_variation
    description: Measure of variation between different experimental batches.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: Reproducibility
    domain_of:
    - Reproducibility
    range: float
  inter_laboratory_consistency:
    name: inter_laboratory_consistency
    description: Measure of consistency across different laboratories.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: Reproducibility
    domain_of:
    - Reproducibility
    range: float
  replicate_count:
    name: replicate_count
    description: Number of experimental replicates used in assessment.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: Reproducibility
    domain_of:
    - Reproducibility
    range: integer
  quality_control_metrics:
    name: quality_control_metrics
    description: List of quality control measures and their values.
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    owner: Reproducibility
    domain_of:
    - Reproducibility
    range: QualityControlMetric
    multivalued: true
    inlined: true
    inlined_as_list: true
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    owner: Reproducibility
    domain_of:
    - NamedThing
    - Reference
    - BiolinkEntity
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    slot_uri: schema:name
    owner: Reproducibility
    domain_of:
    - NamedThing
    - BiolinkEntity
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    slot_uri: schema:description
    owner: Reproducibility
    domain_of:
    - NamedThing
    - BiolinkEntity
    range: string
  type:
    name: type
    from_schema: https://w3id.org/monarch-initiative/namo
    rank: 1000
    designates_type: true
    owner: Reproducibility
    domain_of:
    - NamedThing
    range: string