Class: CellOntologyTerm

erDiagram CellOntologyTerm { string id string label }

Inheritance

NamedEntity
- CellOntologyTerm

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 String	A unique identifier for the named entity	NamedEntity
label	0..1 String	The label (name) of the named thing	NamedEntity

Usages

used by	used in	type	used
CellType	equivalent_to	range	CellOntologyTerm
CellType	parents	range	CellOntologyTerm
CellType	subtypes	range	CellOntologyTerm
ImmuneCell	equivalent_to	range	CellOntologyTerm
ImmuneCell	parents	range	CellOntologyTerm
ImmuneCell	subtypes	range	CellOntologyTerm
Neuron	equivalent_to	range	CellOntologyTerm
Neuron	parents	range	CellOntologyTerm
Neuron	subtypes	range	CellOntologyTerm
Interneuron	equivalent_to	range	CellOntologyTerm
Interneuron	parents	range	CellOntologyTerm
Interneuron	subtypes	range	CellOntologyTerm

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

CL
FBbt
WBbt

Annotations

property	value
annotators	sqlite:obo:cl, sqlite:obo:fbbt, sqlite:obo:wbbt

Schema Source

from schema: http://w3id.org/ontogpt/cell_type

Mappings

Mapping Type	Mapped Value
self	cell_type:CellOntologyTerm
native	cell_type:CellOntologyTerm

LinkML Source

Direct

name: CellOntologyTerm
id_prefixes:
- CL
- FBbt
- WBbt
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:cl, sqlite:obo:fbbt, sqlite:obo:wbbt
from_schema: http://w3id.org/ontogpt/cell_type
is_a: NamedEntity

Induced

name: CellOntologyTerm
id_prefixes:
- CL
- FBbt
- WBbt
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:cl, sqlite:obo:fbbt, sqlite:obo:wbbt
from_schema: http://w3id.org/ontogpt/cell_type
is_a: NamedEntity
attributes:
  id:
    name: id
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    description: A unique identifier for the named entity
    comments:
    - this is populated during the grounding and normalization step
    from_schema: http://w3id.org/ontogpt/cell_type
    identifier: true
    alias: id
    owner: CellOntologyTerm
    domain_of:
    - CellType
    - NamedEntity
    - Publication
    range: string
    required: true
  label:
    name: label
    annotations:
      owl:
        tag: owl
        value: AnnotationProperty, AnnotationAssertion
    description: The label (name) of the named thing
    from_schema: http://w3id.org/ontogpt/cell_type
    aliases:
    - name
    slot_uri: rdfs:label
    alias: label
    owner: CellOntologyTerm
    domain_of:
    - CellType
    - NamedEntity
    range: string