Class: ChemicalToDiseaseDocument

A document that contains chemical to disease relations.

erDiagram ChemicalToDiseaseDocument { } ChemicalToDiseaseRelationship { string qualifier } NamedEntity { string id string label } Disease { string id string label } ChemicalToDiseasePredicate { string id string label } Chemical { string id string label } Publication { string id string title string abstract string combined_text string full_text } ChemicalToDiseaseDocument ||--|o Publication : "publication" ChemicalToDiseaseDocument ||--}o ChemicalToDiseaseRelationship : "triples" ChemicalToDiseaseRelationship ||--|o Chemical : "subject" ChemicalToDiseaseRelationship ||--|o ChemicalToDiseasePredicate : "predicate" ChemicalToDiseaseRelationship ||--|o Disease : "object" ChemicalToDiseaseRelationship ||--|o NamedEntity : "subject_qualifier" ChemicalToDiseaseRelationship ||--|o NamedEntity : "object_qualifier"

Inheritance

TextWithTriples
- ChemicalToDiseaseDocument

Slots

Name	Cardinality and Range	Description	Inheritance
publication	0..1 Publication		TextWithTriples
triples	* ChemicalToDiseaseRelationship		TextWithTriples

Identifier and Mapping Information

Schema Source

from schema: http://w3id.org/ontogpt/ctd

Mappings

Mapping Type	Mapped Value
self	drug:ChemicalToDiseaseDocument
native	drug:ChemicalToDiseaseDocument

LinkML Source

Direct

name: ChemicalToDiseaseDocument
description: A document that contains chemical to disease relations.
from_schema: http://w3id.org/ontogpt/ctd
is_a: TextWithTriples
slot_usage:
  triples:
    name: triples
    annotations:
      prompt:
        tag: prompt
        value: 'A semi-colon separated list of chemical to disease relationships,
          where the relationship is either INDUCES or TREATS. for example: Lidocaine
          INDUCES cardiac asystole;  Hydroxychloroquine NOT TREATS COVID-19; Methyldopa
          INDUCES Hypotension; Monosodium Glutamate NOT INDUCES Headache; Imatinib
          TREATS cancer'
      exclude:
        tag: exclude
        value: Lidocaine, cardiac asystole, Hydroxychloroquine, COVID-19, Methyldopa,
          Headache, Imatinib, cancer
    domain_of:
    - TextWithTriples
    range: ChemicalToDiseaseRelationship

Induced

name: ChemicalToDiseaseDocument
description: A document that contains chemical to disease relations.
from_schema: http://w3id.org/ontogpt/ctd
is_a: TextWithTriples
slot_usage:
  triples:
    name: triples
    annotations:
      prompt:
        tag: prompt
        value: 'A semi-colon separated list of chemical to disease relationships,
          where the relationship is either INDUCES or TREATS. for example: Lidocaine
          INDUCES cardiac asystole;  Hydroxychloroquine NOT TREATS COVID-19; Methyldopa
          INDUCES Hypotension; Monosodium Glutamate NOT INDUCES Headache; Imatinib
          TREATS cancer'
      exclude:
        tag: exclude
        value: Lidocaine, cardiac asystole, Hydroxychloroquine, COVID-19, Methyldopa,
          Headache, Imatinib, cancer
    domain_of:
    - TextWithTriples
    range: ChemicalToDiseaseRelationship
attributes:
  publication:
    name: publication
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    from_schema: http://w3id.org/ontogpt/ctd
    rank: 1000
    alias: publication
    owner: ChemicalToDiseaseDocument
    domain_of:
    - TextWithTriples
    - TextWithEntity
    range: Publication
    inlined: true
  triples:
    name: triples
    annotations:
      prompt:
        tag: prompt
        value: 'A semi-colon separated list of chemical to disease relationships,
          where the relationship is either INDUCES or TREATS. for example: Lidocaine
          INDUCES cardiac asystole;  Hydroxychloroquine NOT TREATS COVID-19; Methyldopa
          INDUCES Hypotension; Monosodium Glutamate NOT INDUCES Headache; Imatinib
          TREATS cancer'
      exclude:
        tag: exclude
        value: Lidocaine, cardiac asystole, Hydroxychloroquine, COVID-19, Methyldopa,
          Headache, Imatinib, cancer
    from_schema: http://w3id.org/ontogpt/ctd
    rank: 1000
    multivalued: true
    alias: triples
    owner: ChemicalToDiseaseDocument
    domain_of:
    - TextWithTriples
    range: ChemicalToDiseaseRelationship
    inlined: true
    inlined_as_list: true