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Class: Phenotype

URI: diag:Phenotype

erDiagram Phenotype { string id string label }

Inheritance

Slots

Name Cardinality and Range Description Inheritance
id 1
String		 A unique identifier for the named entity NamedEntity
label 0..1
String		 The label (name) of the named thing NamedEntity

Usages

used by used in type used
DiagnosticProceduretoPhenotypeAssociation object range Phenotype

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

  • HP

Annotations

property value
annotators sqlite:obo:hp

Schema Source

  • from schema: http://w3id.org/ontogpt/diagnostic_procedure

Mappings

Mapping Type Mapped Value
self diag:Phenotype
native diag:Phenotype

LinkML Source

Direct

name: Phenotype
id_prefixes:
- HP
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:hp
from_schema: http://w3id.org/ontogpt/diagnostic_procedure
is_a: NamedEntity

Induced

name: Phenotype
id_prefixes:
- HP
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:hp
from_schema: http://w3id.org/ontogpt/diagnostic_procedure
is_a: NamedEntity
attributes:
  id:
    name: id
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    description: A unique identifier for the named entity
    comments:
    - this is populated during the grounding and normalization step
    from_schema: http://w3id.org/ontogpt/diagnostic_procedure
    rank: 1000
    identifier: true
    alias: id
    owner: Phenotype
    domain_of:
    - NamedEntity
    - Publication
    range: string
    required: true
  label:
    name: label
    annotations:
      owl:
        tag: owl
        value: AnnotationProperty, AnnotationAssertion
    description: The label (name) of the named thing
    from_schema: http://w3id.org/ontogpt/diagnostic_procedure
    aliases:
    - name
    rank: 1000
    slot_uri: rdfs:label
    alias: label
    owner: Phenotype
    domain_of:
    - NamedEntity
    range: string