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Class: OntologyTerm

URI: go_simple:OntologyTerm

erDiagram OntologyTerm { string id string label }

Inheritance

Slots

Name Cardinality and Range Description Inheritance
id 1
String		 A unique identifier for the named entity NamedEntity
label 0..1
String		 The label (name) of the named thing NamedEntity

Usages

used by used in type used
OntologyTermSet terms range OntologyTerm

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

  • GO

Annotations

property value
annotators sqlite:obo:go

Schema Source

  • from schema: http://w3id.org/ontogpt/go_simple

Mappings

Mapping Type Mapped Value
self go_simple:OntologyTerm
native go_simple:OntologyTerm

LinkML Source

Direct

name: OntologyTerm
id_prefixes:
- GO
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:go
  prompt:
    tag: prompt
    value: 'The name of a Gene Ontology term. Examples include: regulation of dehydroepiandrosterone
      secretion, lignan metabolic process, ITP catabolic process, determination of
      imaginal disc primordium, kinetoplast'
from_schema: http://w3id.org/ontogpt/go_simple
is_a: NamedEntity

Induced

name: OntologyTerm
id_prefixes:
- GO
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:go
  prompt:
    tag: prompt
    value: 'The name of a Gene Ontology term. Examples include: regulation of dehydroepiandrosterone
      secretion, lignan metabolic process, ITP catabolic process, determination of
      imaginal disc primordium, kinetoplast'
from_schema: http://w3id.org/ontogpt/go_simple
is_a: NamedEntity
attributes:
  id:
    name: id
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    description: A unique identifier for the named entity
    comments:
    - this is populated during the grounding and normalization step
    from_schema: http://w3id.org/ontogpt/go_simple
    rank: 1000
    identifier: true
    alias: id
    owner: OntologyTerm
    domain_of:
    - NamedEntity
    - Publication
    range: string
    required: true
  label:
    name: label
    annotations:
      owl:
        tag: owl
        value: AnnotationProperty, AnnotationAssertion
    description: The label (name) of the named thing
    from_schema: http://w3id.org/ontogpt/go_simple
    aliases:
    - name
    rank: 1000
    slot_uri: rdfs:label
    alias: label
    owner: OntologyTerm
    domain_of:
    - NamedEntity
    range: string