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Class: GeneMolecularActivityRelationship

URI: gocam:GeneMolecularActivityRelationship

erDiagram GeneMolecularActivityRelationship { } MolecularActivity { string id string label } Gene { string id string label } GeneMolecularActivityRelationship ||--|o Gene : "gene" GeneMolecularActivityRelationship ||--|o MolecularActivity : "molecular_activity"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
gene 0..1
Gene		 direct
molecular_activity 0..1
MolecularActivity		 direct

Usages

used by used in type used
GoCamAnnotations gene_functions range GeneMolecularActivityRelationship

Identifier and Mapping Information

Annotations

property value
prompt.example TODO

gene: HGNC:1234 molecular_activity: GO:0003674 |

Schema Source

  • from schema: http://w3id.org/ontogpt/gocam

Mappings

Mapping Type Mapped Value
self gocam:GeneMolecularActivityRelationship
native gocam:GeneMolecularActivityRelationship

LinkML Source

Direct

name: GeneMolecularActivityRelationship
annotations:
  prompt.example:
    tag: prompt.example
    value: 'TODO


      gene: HGNC:1234

      molecular_activity: GO:0003674'
from_schema: http://w3id.org/ontogpt/gocam
is_a: CompoundExpression
attributes:
  gene:
    name: gene
    annotations:
      prompt:
        tag: prompt
        value: the name of the gene in the pair. This comes first.
    from_schema: http://w3id.org/ontogpt/gocam
    domain_of:
    - GeneOrganismRelationship
    - GeneMolecularActivityRelationship
    - GeneMolecularActivityRelationship2
    - GeneSubcellularLocalizationRelationship
    range: Gene
  molecular_activity:
    name: molecular_activity
    annotations:
      prompt:
        tag: prompt
        value: the name of the molecular function in the pair. This comes second.
          May be a GO term.
    from_schema: http://w3id.org/ontogpt/gocam
    rank: 1000
    domain_of:
    - GeneMolecularActivityRelationship
    - GeneMolecularActivityRelationship2
    range: MolecularActivity

Induced

name: GeneMolecularActivityRelationship
annotations:
  prompt.example:
    tag: prompt.example
    value: 'TODO


      gene: HGNC:1234

      molecular_activity: GO:0003674'
from_schema: http://w3id.org/ontogpt/gocam
is_a: CompoundExpression
attributes:
  gene:
    name: gene
    annotations:
      prompt:
        tag: prompt
        value: the name of the gene in the pair. This comes first.
    from_schema: http://w3id.org/ontogpt/gocam
    alias: gene
    owner: GeneMolecularActivityRelationship
    domain_of:
    - GeneOrganismRelationship
    - GeneMolecularActivityRelationship
    - GeneMolecularActivityRelationship2
    - GeneSubcellularLocalizationRelationship
    range: Gene
  molecular_activity:
    name: molecular_activity
    annotations:
      prompt:
        tag: prompt
        value: the name of the molecular function in the pair. This comes second.
          May be a GO term.
    from_schema: http://w3id.org/ontogpt/gocam
    rank: 1000
    alias: molecular_activity
    owner: GeneMolecularActivityRelationship
    domain_of:
    - GeneMolecularActivityRelationship
    - GeneMolecularActivityRelationship2
    range: MolecularActivity