RADx-UP CDE Schema¶
Overview¶
The RADx-UP (Rapid Acceleration of Diagnostics - Underserved Populations) CDE schema represents data elements used in COVID-19 testing and outcomes research focused on underserved populations.
Schema Details¶
ID:
https://example.org/schemas/radx_up_cde
Name: RADx_UP_CDESchema
Version: 1.0.0
Source: RADx-UP Initiative
Structure¶
The RADx-UP schema includes data elements for:
COVID-19 testing protocols
Demographics and social determinants of health
Clinical outcomes
Community engagement measures
Health equity indicators
Data Dictionary¶
The schema is based on the RADx-UP Phase 3 Tier 1 and Tier 2 data dictionary.
Usage¶
from linkml_runtime.utils.schemaview import SchemaView
schema = SchemaView("linkml/radx_up_schema.yaml")
classes = schema.all_classes()
print(f"Schema contains {len(classes)} classes")
Files¶
Schema definition:
linkml/radx_up_schema.yaml
Source data:
data/radx-up/RADxUP_1.7_Phase3_Tier1_Tier2_DataDictionary-1.csv