Class: Entity

Represents an Entity in the Monarch KG data model

URI: https://w3id.org/monarch/monarch-py/:Entity

 classDiagram
    class Entity
      Entity <|-- Node
      Entity <|-- SearchResult

      Entity : category

      Entity : description

      Entity : id

      Entity : in_taxon

      Entity : in_taxon_label

      Entity : name

      Entity : provided_by

      Entity : symbol

      Entity : synonym

      Entity : xref

Inheritance

• Entity
  • Node
  • SearchResult

Slots

Name	Cardinality and Range	Description	Inheritance
id	1..1 String		direct
category	0..1 String		direct
name	0..1 String		direct
description	0..1 String		direct
xref	0..* String		direct
provided_by	0..1 String		direct
in_taxon	0..1 String	The biolink taxon that the entity is in the closure of	direct
in_taxon_label	0..1 String	The label of the biolink taxon that the entity is in the closure of	direct
symbol	0..1 String		direct
synonym	0..* String		direct

Usages

used by	used in	type	used
EntityResults	items	range	Entity
Node	inheritance	range	Entity
NodeHierarchy	super_classes	range	Entity
NodeHierarchy	equivalent_classes	range	Entity
NodeHierarchy	sub_classes	range	Entity

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/monarch/monarch-py

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/monarch/monarch-py/:Entity
native	https://w3id.org/monarch/monarch-py/:Entity

LinkML Source

Direct

name: Entity
description: Represents an Entity in the Monarch KG data model
from_schema: https://w3id.org/monarch/monarch-py
slots:
- id
- category
- name
- description
- xref
- provided_by
- in_taxon
- in_taxon_label
- symbol
- synonym

Induced

name: Entity
description: Represents an Entity in the Monarch KG data model
from_schema: https://w3id.org/monarch/monarch-py
attributes:
  id:
    name: id
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    identifier: true
    alias: id
    owner: Entity
    domain_of:
    - Association
    - Entity
    - HistoPheno
    - HistoBin
    range: string
    required: true
  category:
    name: category
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    multivalued: false
    alias: category
    owner: Entity
    domain_of:
    - Association
    - AssociationCount
    - AssociationTypeMapping
    - Entity
    range: string
  name:
    name: name
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: name
    owner: Entity
    domain_of:
    - Entity
    range: string
  description:
    name: description
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: description
    owner: Entity
    domain_of:
    - Entity
    range: string
  xref:
    name: xref
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    multivalued: true
    alias: xref
    owner: Entity
    domain_of:
    - Entity
    range: string
  provided_by:
    name: provided_by
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: provided_by
    owner: Entity
    domain_of:
    - Association
    - Entity
    range: string
  in_taxon:
    name: in_taxon
    description: The biolink taxon that the entity is in the closure of.
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: in_taxon
    owner: Entity
    domain_of:
    - Entity
    - Node
    range: string
  in_taxon_label:
    name: in_taxon_label
    description: The label of the biolink taxon that the entity is in the closure
      of.
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: in_taxon_label
    owner: Entity
    domain_of:
    - Entity
    - Node
    range: string
  symbol:
    name: symbol
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    alias: symbol
    owner: Entity
    domain_of:
    - Entity
    range: string
  synonym:
    name: synonym
    from_schema: https://w3id.org/monarch/monarch-py
    rank: 1000
    multivalued: true
    alias: synonym
    owner: Entity
    domain_of:
    - Entity
    range: string