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Class: BioticInteraction

URI: bp:BioticInteraction

erDiagram BioticInteraction { } InteractionType { string id string label } Taxon { string id string label } BioticInteraction ||--|o Taxon : "source_taxon" BioticInteraction ||--|o Taxon : "target_taxon" BioticInteraction ||--|o InteractionType : "interaction_type"

Slots

Name Cardinality and Range Description Inheritance
source_taxon 0..1
Taxon		 the taxon that is the subject of the interaction direct
target_taxon 0..1
Taxon		 the taxon that is the object of the interaction direct
interaction_type 0..1
InteractionType		 the type of interaction direct

Usages

used by used in type used
Container interactions range BioticInteraction

Identifier and Mapping Information

Annotations

property value
prompt A semi-colon separated list of taxon to taxon relationships

Schema Source

  • from schema: https://w3id.org/ontogpt/biotic_interaction

Mappings

Mapping Type Mapped Value
self bp:BioticInteraction
native bp:BioticInteraction

LinkML Source

Direct

name: BioticInteraction
annotations:
  prompt:
    tag: prompt
    value: A semi-colon separated list of taxon to taxon relationships
  prompt.example:
    tag: prompt.example
    value: Carcharodon carcharias eats elephant seal; Pandarus sinuatus parasitizes
      Carcharodon carcharias; orca eats Carcharodon carcharias
from_schema: https://w3id.org/ontogpt/biotic_interaction
attributes:
  source_taxon:
    name: source_taxon
    description: the taxon that is the subject of the interaction
    from_schema: https://w3id.org/ontogpt/biotic_interaction
    rank: 1000
    domain_of:
    - BioticInteraction
    range: Taxon
  target_taxon:
    name: target_taxon
    description: the taxon that is the object of the interaction
    from_schema: https://w3id.org/ontogpt/biotic_interaction
    rank: 1000
    domain_of:
    - BioticInteraction
    range: Taxon
  interaction_type:
    name: interaction_type
    description: the type of interaction
    from_schema: https://w3id.org/ontogpt/biotic_interaction
    rank: 1000
    domain_of:
    - BioticInteraction
    range: InteractionType

Induced

name: BioticInteraction
annotations:
  prompt:
    tag: prompt
    value: A semi-colon separated list of taxon to taxon relationships
  prompt.example:
    tag: prompt.example
    value: Carcharodon carcharias eats elephant seal; Pandarus sinuatus parasitizes
      Carcharodon carcharias; orca eats Carcharodon carcharias
from_schema: https://w3id.org/ontogpt/biotic_interaction
attributes:
  source_taxon:
    name: source_taxon
    description: the taxon that is the subject of the interaction
    from_schema: https://w3id.org/ontogpt/biotic_interaction
    rank: 1000
    alias: source_taxon
    owner: BioticInteraction
    domain_of:
    - BioticInteraction
    range: Taxon
  target_taxon:
    name: target_taxon
    description: the taxon that is the object of the interaction
    from_schema: https://w3id.org/ontogpt/biotic_interaction
    rank: 1000
    alias: target_taxon
    owner: BioticInteraction
    domain_of:
    - BioticInteraction
    range: Taxon
  interaction_type:
    name: interaction_type
    description: the type of interaction
    from_schema: https://w3id.org/ontogpt/biotic_interaction
    rank: 1000
    alias: interaction_type
    owner: BioticInteraction
    domain_of:
    - BioticInteraction
    range: InteractionType