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Class: HumanPhenotypeSet

URI: human_phenotype:HumanPhenotypeSet

erDiagram HumanPhenotypeSet { string id string label } HumanPhenotype { string id string label } HumanPhenotypeSet ||--}o HumanPhenotype : "phenotypes"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
phenotypes 0..*
HumanPhenotype		 A semicolon-separated list of human phenotypes, including symptoms of disease direct
id 1..1
String		 A unique identifier for the named entity NamedEntity
label 0..1
String		 The label (name) of the named thing NamedEntity

Identifier and Mapping Information

Schema Source

  • from schema: http://w3id.org/ontogpt/human_phenotype

Mappings

Mapping Type Mapped Value
self human_phenotype:HumanPhenotypeSet
native human_phenotype:HumanPhenotypeSet

LinkML Source

Direct

name: HumanPhenotypeSet
from_schema: http://w3id.org/ontogpt/human_phenotype
is_a: NamedEntity
attributes:
  phenotypes:
    name: phenotypes
    description: A semicolon-separated list of human phenotypes, including symptoms
      of disease. It must be semicolon-separated. Labels containing the word 'with'
      should be split into multiple phenotypes.
    from_schema: http://w3id.org/ontogpt/human_phenotype
    rank: 1000
    multivalued: true
    range: HumanPhenotype
tree_root: true

Induced

name: HumanPhenotypeSet
from_schema: http://w3id.org/ontogpt/human_phenotype
is_a: NamedEntity
attributes:
  phenotypes:
    name: phenotypes
    description: A semicolon-separated list of human phenotypes, including symptoms
      of disease. It must be semicolon-separated. Labels containing the word 'with'
      should be split into multiple phenotypes.
    from_schema: http://w3id.org/ontogpt/human_phenotype
    rank: 1000
    multivalued: true
    alias: phenotypes
    owner: HumanPhenotypeSet
    domain_of:
    - HumanPhenotypeSet
    range: HumanPhenotype
  id:
    name: id
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    description: A unique identifier for the named entity
    comments:
    - this is populated during the grounding and normalization step
    from_schema: http://w3id.org/ontogpt/human_phenotype
    rank: 1000
    identifier: true
    alias: id
    owner: HumanPhenotypeSet
    domain_of:
    - NamedEntity
    - Publication
    range: string
    required: true
  label:
    name: label
    annotations:
      owl:
        tag: owl
        value: AnnotationProperty, AnnotationAssertion
    description: The label (name) of the named thing
    from_schema: http://w3id.org/ontogpt/human_phenotype
    aliases:
    - name
    rank: 1000
    slot_uri: rdfs:label
    alias: label
    owner: HumanPhenotypeSet
    domain_of:
    - NamedEntity
    range: string
tree_root: true