reaction Template
A template for reactions
URI: https://w3id.org/ontogpt/reaction
Name: reaction-template
Schema Diagram
erDiagram
Reaction {
string label
string description
stringList synonyms
string id
}
GeneToReaction {
}
ReactionDocument {
}
GeneReactionPairing {
}
ReactionGrouping {
string id
string label
}
ChemicalEntity {
string id
string label
}
Evidence {
string id
string label
}
Gene {
string id
string label
}
Organism {
string id
string label
}
Any {
}
ExtractionResult {
string input_id
string input_title
string input_text
string raw_completion_output
string prompt
}
NamedEntity {
string id
string label
}
CompoundExpression {
}
Triple {
string qualifier
}
TextWithTriples {
}
RelationshipType {
string id
string label
}
Publication {
string id
string title
string abstract
string combined_text
string full_text
}
AnnotatorResult {
string subject_text
string object_id
string object_text
}
Reaction ||--|o ReactionGrouping : "subclass_of"
Reaction ||--}o ChemicalEntity : "left_side"
Reaction ||--}o ChemicalEntity : "right_side"
GeneToReaction ||--|o Gene : "gene"
GeneToReaction ||--}o Reaction : "reactions"
GeneToReaction ||--|o Organism : "organism"
ReactionDocument ||--}o Gene : "genes"
ReactionDocument ||--}o Reaction : "reactions"
ReactionDocument ||--}o GeneReactionPairing : "gene_reaction_pairings"
ReactionDocument ||--|o Organism : "organism"
ReactionDocument ||--}o Evidence : "has_evidence"
GeneReactionPairing ||--|o Gene : "gene"
GeneReactionPairing ||--|o Reaction : "reaction"
ExtractionResult ||--|o Any : "extracted_object"
ExtractionResult ||--}o Any : "named_entities"
Triple ||--|o NamedEntity : "subject"
Triple ||--|o RelationshipType : "predicate"
Triple ||--|o NamedEntity : "object"
Triple ||--|o NamedEntity : "subject_qualifier"
Triple ||--|o NamedEntity : "object_qualifier"
TextWithTriples ||--|o Publication : "publication"
TextWithTriples ||--}o Triple : "triples"
Classes
Slots
Enumerations
Types
Type |
Description |
Boolean |
A binary (true or false) value |
Curie |
a compact URI |
Date |
a date (year, month and day) in an idealized calendar |
DateOrDatetime |
Either a date or a datetime |
Datetime |
The combination of a date and time |
Decimal |
A real number with arbitrary precision that conforms to the xsd:decimal speci... |
Double |
A real number that conforms to the xsd:double specification |
Float |
A real number that conforms to the xsd:float specification |
Integer |
An integer |
Ncname |
Prefix part of CURIE |
Nodeidentifier |
A URI, CURIE or BNODE that represents a node in a model |
Objectidentifier |
A URI or CURIE that represents an object in the model |
String |
A character string |
Time |
A time object represents a (local) time of day, independent of any particular... |
Uri |
a complete URI |
Uriorcurie |
a URI or a CURIE |
Subsets