Class: GeneExposureRelationship

URI: ibdlit:GeneExposureRelationship

erDiagram GeneExposureRelationship { } NamedEntity { string id string label } Gene { string id string label } ChemicalExposureToGenePredicate { string id string label } ChemicalExposure { string id string label } GeneExposureRelationship ||--|o ChemicalExposure : "subject" GeneExposureRelationship ||--|o ChemicalExposureToGenePredicate : "predicate" GeneExposureRelationship ||--|o Gene : "object" GeneExposureRelationship ||--|o NamedEntity : "subject_qualifier" GeneExposureRelationship ||--|o NamedEntity : "object_qualifier"

Inheritance

CompoundExpression
- GeneExposureRelationship

Slots

Name	Cardinality and Range	Description	Inheritance
subject	0..1 ChemicalExposure	The name of the exposure, such as a exposure to a chemical toxin	direct
predicate	0..1 ChemicalExposureToGenePredicate	The name of the type of relationship between a chemical exposure and a gene	direct
object	0..1 Gene	The name of the gene in the pair	direct
subject_qualifier	0..1 NamedEntity	An optional qualifier or modifier for the chemical exposure	direct
object_qualifier	0..1 NamedEntity	An optional qualifier or modifier for the gene	direct

Usages

used by	used in	type	used
IBDAnnotations	gene_exposures_relationships	range	GeneExposureRelationship

Identifier and Mapping Information

Schema Source

from schema: http://w3id.org/ontogpt/ibd_literature

Mappings

Mapping Type	Mapped Value
self	ibdlit:GeneExposureRelationship
native	ibdlit:GeneExposureRelationship

LinkML Source

Direct

name: GeneExposureRelationship
from_schema: http://w3id.org/ontogpt/ibd_literature
is_a: CompoundExpression
attributes:
  subject:
    name: subject
    description: The name of the exposure, such as a exposure to a chemical toxin.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    range: ChemicalExposure
  predicate:
    name: predicate
    description: The name of the type of relationship between a chemical exposure
      and a gene.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    range: ChemicalExposureToGenePredicate
  object:
    name: object
    description: The name of the gene in the pair. This comes second in the pair.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    range: Gene
  subject_qualifier:
    name: subject_qualifier
    description: An optional qualifier or modifier for the chemical exposure.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    range: NamedEntity
  object_qualifier:
    name: object_qualifier
    description: An optional qualifier or modifier for the gene.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    range: NamedEntity

Induced

name: GeneExposureRelationship
from_schema: http://w3id.org/ontogpt/ibd_literature
is_a: CompoundExpression
attributes:
  subject:
    name: subject
    description: The name of the exposure, such as a exposure to a chemical toxin.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    alias: subject
    owner: GeneExposureRelationship
    domain_of:
    - GeneExposureRelationship
    - DiseaseCellularProcessRelationship
    - Triple
    range: ChemicalExposure
  predicate:
    name: predicate
    description: The name of the type of relationship between a chemical exposure
      and a gene.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    alias: predicate
    owner: GeneExposureRelationship
    domain_of:
    - GeneExposureRelationship
    - DiseaseCellularProcessRelationship
    - Triple
    range: ChemicalExposureToGenePredicate
  object:
    name: object
    description: The name of the gene in the pair. This comes second in the pair.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    alias: object
    owner: GeneExposureRelationship
    domain_of:
    - GeneExposureRelationship
    - DiseaseCellularProcessRelationship
    - Triple
    range: Gene
  subject_qualifier:
    name: subject_qualifier
    description: An optional qualifier or modifier for the chemical exposure.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    alias: subject_qualifier
    owner: GeneExposureRelationship
    domain_of:
    - GeneExposureRelationship
    - DiseaseCellularProcessRelationship
    - Triple
    range: NamedEntity
  object_qualifier:
    name: object_qualifier
    description: An optional qualifier or modifier for the gene.
    from_schema: http://w3id.org/ontogpt/ibd_literature
    rank: 1000
    alias: object_qualifier
    owner: GeneExposureRelationship
    domain_of:
    - GeneExposureRelationship
    - DiseaseCellularProcessRelationship
    - Triple
    range: NamedEntity