Skip to content

Class: MaxoAnnotations

URI: maxo_extract:MaxoAnnotations

erDiagram MaxoAnnotations { } Triple { string qualifier } NamedEntity { string id string label } RelationshipType { string id string label } Publication { string id string title string abstract string combined_text string full_text } ActionToSymptomRelationship { string qualifier } Symptom { string id string label } Action { string id string label } ActionToDiseaseRelationship { string qualifier } Disease { string id string label } MaxoAnnotations ||--}o Action : "action" MaxoAnnotations ||--}o Disease : "disease" MaxoAnnotations ||--}o Symptom : "symptom" MaxoAnnotations ||--}o ActionToDiseaseRelationship : "action_to_disease" MaxoAnnotations ||--}o ActionToSymptomRelationship : "action_to_symptom" MaxoAnnotations ||--|o Publication : "publication" MaxoAnnotations ||--}o Triple : "triples" Triple ||--|o NamedEntity : "subject" Triple ||--|o RelationshipType : "predicate" Triple ||--|o NamedEntity : "object" Triple ||--|o NamedEntity : "subject_qualifier" Triple ||--|o NamedEntity : "object_qualifier" ActionToSymptomRelationship ||--|o Action : "subject" ActionToSymptomRelationship ||--|o NamedEntity : "predicate" ActionToSymptomRelationship ||--}o Symptom : "object" ActionToSymptomRelationship ||--|o NamedEntity : "subject_qualifier" ActionToSymptomRelationship ||--|o NamedEntity : "object_qualifier" ActionToDiseaseRelationship ||--|o Action : "subject" ActionToDiseaseRelationship ||--|o NamedEntity : "predicate" ActionToDiseaseRelationship ||--}o Disease : "object" ActionToDiseaseRelationship ||--|o NamedEntity : "subject_qualifier" ActionToDiseaseRelationship ||--|o NamedEntity : "object_qualifier"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
action 0..*
Action		 Semicolon-separated list of medical actions direct
disease 0..*
Disease		 Semicolon-separated list of diseases direct
symptom 0..*
Symptom		 Semicolon-separated list of symptoms direct
action_to_disease 0..*
ActionToDiseaseRelationship		 direct
action_to_symptom 0..*
ActionToSymptomRelationship		 direct
publication 0..1
Publication		 TextWithTriples
triples 0..*
Triple		 TextWithTriples

Identifier and Mapping Information

Schema Source

  • from schema: http://w3id.org/ontogpt/maxo

Mappings

Mapping Type Mapped Value
self maxo_extract:MaxoAnnotations
native maxo_extract:MaxoAnnotations

LinkML Source

Direct

name: MaxoAnnotations
from_schema: http://w3id.org/ontogpt/maxo
is_a: TextWithTriples
attributes:
  action:
    name: action
    annotations:
      prompt:
        tag: prompt
        value: Semicolon-separated list of medical actions, where each is a clinically
          prescribed procedure, therapy, intervention, or recommendation.
    description: Semicolon-separated list of medical actions.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    range: Action
  disease:
    name: disease
    description: Semicolon-separated list of diseases.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    range: Disease
  symptom:
    name: symptom
    description: Semicolon-separated list of symptoms.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    range: Symptom
  action_to_disease:
    name: action_to_disease
    annotations:
      prompt:
        tag: prompt
        value: Semicolon-separated list of medical action to disease relationships,
          where each is a triple representing a relationship between a medical action
          and a disease, for example, radiation therapy TREATS cancer, or PET scan
          IS USED TO DIAGNOSE myocarditis.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    range: ActionToDiseaseRelationship
  action_to_symptom:
    name: action_to_symptom
    annotations:
      prompt:
        tag: prompt
        value: A triple representing a relationship between a medical action (A clinically
          prescribed procedure, therapy, intervention, or recommendation) and a symptom,
          for example, a chest X-ray IS USED TO DIAGNOSE pleural effusion.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    range: ActionToSymptomRelationship
tree_root: true

Induced

name: MaxoAnnotations
from_schema: http://w3id.org/ontogpt/maxo
is_a: TextWithTriples
attributes:
  action:
    name: action
    annotations:
      prompt:
        tag: prompt
        value: Semicolon-separated list of medical actions, where each is a clinically
          prescribed procedure, therapy, intervention, or recommendation.
    description: Semicolon-separated list of medical actions.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    alias: action
    owner: MaxoAnnotations
    domain_of:
    - MaxoAnnotations
    range: Action
  disease:
    name: disease
    description: Semicolon-separated list of diseases.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    alias: disease
    owner: MaxoAnnotations
    domain_of:
    - MaxoAnnotations
    range: Disease
  symptom:
    name: symptom
    description: Semicolon-separated list of symptoms.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    alias: symptom
    owner: MaxoAnnotations
    domain_of:
    - MaxoAnnotations
    range: Symptom
  action_to_disease:
    name: action_to_disease
    annotations:
      prompt:
        tag: prompt
        value: Semicolon-separated list of medical action to disease relationships,
          where each is a triple representing a relationship between a medical action
          and a disease, for example, radiation therapy TREATS cancer, or PET scan
          IS USED TO DIAGNOSE myocarditis.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    alias: action_to_disease
    owner: MaxoAnnotations
    domain_of:
    - MaxoAnnotations
    range: ActionToDiseaseRelationship
  action_to_symptom:
    name: action_to_symptom
    annotations:
      prompt:
        tag: prompt
        value: A triple representing a relationship between a medical action (A clinically
          prescribed procedure, therapy, intervention, or recommendation) and a symptom,
          for example, a chest X-ray IS USED TO DIAGNOSE pleural effusion.
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    alias: action_to_symptom
    owner: MaxoAnnotations
    domain_of:
    - MaxoAnnotations
    range: ActionToSymptomRelationship
  publication:
    name: publication
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    alias: publication
    owner: MaxoAnnotations
    domain_of:
    - TextWithTriples
    - TextWithEntity
    range: Publication
    inlined: true
  triples:
    name: triples
    from_schema: http://w3id.org/ontogpt/maxo
    rank: 1000
    multivalued: true
    alias: triples
    owner: MaxoAnnotations
    domain_of:
    - TextWithTriples
    range: Triple
    inlined: true
    inlined_as_list: true
tree_root: true