Class: Onset

erDiagram Onset { string years_old stringList decades string juvenile_or_adult string id string label }

Inheritance

NamedEntity
- Onset

Slots

Name	Cardinality and Range	Description	Inheritance
years_old	0..1 String		direct
decades	0..* String		direct
juvenile_or_adult	0..1 String		direct
id	1..1 String	A unique identifier for the named entity	NamedEntity
label	0..1 String	The label (name) of the named thing	NamedEntity

Usages

used by	used in	type	used
MendelianDisease	disease_onsets	range	Onset
Symptom	onset_of_symptom	range	Onset

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

HP

Annotations

property	value
annotators	sqlite:obo:hp, sqlite:obo:hsapdv

Schema Source

from schema: http://w3id.org/ontogpt/mendelian_disease

Mappings

Mapping Type	Mapped Value
self	mendelian_disease:Onset
native	mendelian_disease:Onset

LinkML Source

Direct

name: Onset
id_prefixes:
- HP
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:hp, sqlite:obo:hsapdv
from_schema: http://w3id.org/ontogpt/mendelian_disease
is_a: NamedEntity
attributes:
  years_old:
    name: years_old
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    rank: 1000
  decades:
    name: decades
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    rank: 1000
    multivalued: true
  juvenile_or_adult:
    name: juvenile_or_adult
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    rank: 1000

Induced

name: Onset
id_prefixes:
- HP
annotations:
  annotators:
    tag: annotators
    value: sqlite:obo:hp, sqlite:obo:hsapdv
from_schema: http://w3id.org/ontogpt/mendelian_disease
is_a: NamedEntity
attributes:
  years_old:
    name: years_old
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    rank: 1000
    alias: years_old
    owner: Onset
    domain_of:
    - Onset
    range: string
  decades:
    name: decades
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    rank: 1000
    multivalued: true
    alias: decades
    owner: Onset
    domain_of:
    - Onset
    range: string
  juvenile_or_adult:
    name: juvenile_or_adult
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    rank: 1000
    alias: juvenile_or_adult
    owner: Onset
    domain_of:
    - Onset
    range: string
  id:
    name: id
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    description: A unique identifier for the named entity
    comments:
    - this is populated during the grounding and normalization step
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    rank: 1000
    identifier: true
    alias: id
    owner: Onset
    domain_of:
    - NamedEntity
    - Publication
    range: string
    required: true
  label:
    name: label
    annotations:
      owl:
        tag: owl
        value: AnnotationProperty, AnnotationAssertion
    description: The label (name) of the named thing
    from_schema: http://w3id.org/ontogpt/mendelian_disease
    aliases:
    - name
    rank: 1000
    slot_uri: rdfs:label
    alias: label
    owner: Onset
    domain_of:
    - NamedEntity
    range: string