Statistical analyses

There are many different ways of statistically testing for genotype-phenotype correlations, and the appropriate statistical test depends on the question. This document provides an overview of the tests offered by the GPSEA library and explanations of how they are implemented by our software.

Contents:

• Compare genotype and phenotype groups
  • Fisher exact test (FET)
  • Example analysis
• Compare phenotype scores in genotype groups
  • Mann-Whitney U Test
  • Example analysis
• Compare measurement values
  • Example analysis
• Survival analysis
  • Example analysis